Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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COID Lung Bhattacharjee Cluster Number 2 (54 genes) This page contains all miRNA mediated regulation and functional enrichment for COID Lung Bhattacharjee cluster number 2. Information about lung cancer can be found on Wikipedia, and further information about the "COID Lung Bhattacharjee" dataset can be found in Bhattacharjee et al., 2001. Inferred miRNA Mediated Regulation Weeder-miRvestigator PITA TargetScan zzz999 hsa-mir-548d-3p zzz999 Gene Ontology Enrichment GO ID GO Term Annotated Genes in Cluster GO:0000245 spliceosome assembly 4 GO:0000375 RNA splicing, via transesterification reactions 8 GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 8 GO:0000398 nuclear mRNA splicing, via spliceosome 8 GO:0006397 mRNA processing 11 GO:0008380 RNA splicing 9 GO:0015931 nucleobase, nucleoside, nucleotide and nucleic acid transport 6 GO:0016071 mRNA metabolic process 12 Overlap Between miRNA Target Genes and Enriched Gene Ontology Annotations miRNA Method GO ID GO Term Overlap GO Annotated Genes Cluster Size miRNA Targets Genes P-Value hsa-mir-548d-3p PITA GO:0000245 spliceosome assembly 1 4 54 11 0.1805212 hsa-mir-548d-3p PITA GO:0000375 RNA splicing, via transesterification reactions 2 8 54 11 0.1976875 hsa-mir-548d-3p PITA GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 2 8 54 11 0.1976875 hsa-mir-548d-3p PITA GO:0000398 nuclear mRNA splicing, via spliceosome 2 8 54 11 0.1976875 hsa-mir-548d-3p PITA GO:0006397 mRNA processing 4 11 54 11 0.03451729 hsa-mir-548d-3p PITA GO:0008380 RNA splicing 3 9 54 11 0.07158406 hsa-mir-548d-3p PITA GO:0015931 nucleobase, nucleoside, nucleotide and nucleic acid transport 1 6 54 11 0.3539735 hsa-mir-548d-3p PITA GO:0016071 mRNA metabolic process 4 12 54 11 0.05260189

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